kaptive¶

Kaptive: Surface antigen locus serotyping and analysis toolkit.

This top-level package exposes version information and core module namespaces for surface antigen serotyping, database management, and analysis.

Attributes:

__version__ (str) –

Installed package version or "unknown" if not installed.

Modules:

bgc –

Biosynthetic Gene Cluster (BGC) annotation, prediction, and model training.
cli –

Command line interface framework and root runner for Kaptive.
client –

HTTP client for interacting with the Kaptive Web API.
compare –

Multi-locus comparative genomic analysis and sequence alignment containers.
core –

Core data structures, container protocols, and computational engines.
db –

Kaptive reference database management and data models.
plotting –

Interactive Plotly visualization components for Kaptive serotyping and comparison maps.
serotyping –

Surface antigen serotyping and locus matching engine.